Monday, October 26, 2020
All times displayed are in Pacific Time (PT)
8:30 - 8:35 AM
Welcome and Opening Remarks
Louise Laurent, MD, PhD | UC San Diego
Session One
8:35 - 9:20 AM
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Session Two
9:20 - 9:45 AM
Moderated by Bing Ren, PhD | UC San Diego
Keynote: ​Long Cai, PhD | Caltech
​"Spatial Genomics: In situ single cell analysis by seqFISH"
Moderated by Bing Ren, PhD | UC San Diego
Ting Wu, PhD | Harvard Medical School
"The forest and the trees"
9:45 - 10:10 AM
Francisco Quintana, PhD | Harvard Medical School
"Astrocyte subsets in autoimmune CNS inflammation"
10:10 - 10:20 AM
Session Three
10:20 - 10:45 AM
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10:45 - 11:10 AM
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11:10 - 11:35 AM
Break
Moderated by Louise Laurent, MD, PhD | UC San Diego
Rahul Satijia, PhD | NY Genome Institute ​​​​​
"Integrative analysis of multimodal single-cell data"
John Chang, MD | UC San Diego
"Using single-cell approaches to elucidate T cell memory in health and disease"
Xin Sun, PhD | UC San Diego
“Dissecting the Genetic and Epigenetic Control of Lung Development and Disease”
11:35 - 12:00 PM
David Van Valen, MD, PhD | Caltech
“Single cell biology in a software 2.0 world”
12:00 - 12:10 PM
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12:10 - 12:20 PM
Session Four
12:20 - 1:05 PM​
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1:05 - 1:15 PM
Poster Flash Talk: Douglas Shepherd, PhD | Arizona State University
"Versatile, high-resolution, and large field-of-view oblique plane microscopy for Spatial Omics"
Break
Moderated by Bing Ren, PhD | UC San Diego
Keynote: ​Xiaowei Zhuang, PhD | Harvard
"Spatially resolved single-cell genomics/transcriptomics and cell atlas generation by MERFISH"
Poster Flash Talk: Rohit Singh, PhD | MIT
"Metric learning enables synthesis of heterogeneous single-cell modalities"
1:15 - 1:20 PM





1:20 - 1:30 PM
Matthew Riopel, PhD | Sponsor | 10x Genomics ​​
Break
Session Five
1:30 - 1:55 PM
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1:55 - 2:20 PM

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2:20 - 2:45 PM
Moderated by Gene Yeo, PhD, MBA | UC San Diego
Sydney Shaffer, MD, PhD | U Penn
​"Tracking down the origins of rare therapy resistant cells"
Je Lee, MD, PhD | Cold Spring Harbor Laboratory
​“Genome-wide Spatial Functional Transcriptomics with Subcellular Resolution Reveals Mechanisms of RNA Localization In Vivo"
Katy Börner, PhD | Indiana University
"Mapping Human Anatomical Structures to Cell Types and Biomarkers"
2:45 - 3:10 PM
Richard Bonneau, PhD | New York University
"Machine learning methods for learning dynamic models from spatial and single cell genomics data"
3:10 - 3:20 PM

3:20 - 3:30 PM
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3:30 - 4:30 PM
Poster Flash Talk: Sheng Zhong, PhD | UC San Diego
"Natural display of nuclear-encoded RNA on the cell surface and its impact on cell interaction"
Closing Remarks
Gene Yeo, PhD, MBA | UC San Diego
Poster Session

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